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Running the check/resync over the array appears to have fixed it, I am not able to delete things via SSH, so am freeing up quite a bit of space. Thanks for the assistance!
That usb key looks very handy, thank you, that should avoid having to get another enclosure and build the array outside! I have currently forced a check of the entire array, so will wait for that to finish before rebooting again. There was nothing helpful in dmesg at all, across multiple reboots, no errors etc which was…